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一、项目背景
在实际产品开发周期中,我们无法一次性获取足够多的样本;随着产品上线,不断地一批批积累样本,又需要大量的人工标注,非常耗时。如何循环迭代,把标注样本和训练模型相结合,相互促进? 本项目是在实践中摸索出的一点经验,分享给大家。
二、项目方案
基于“高效的半自动标注工具PaddleSeg”,增加一些环节,形成完整的闭环:以眼底数据集为例,本项目会演示如何进行半自动化交互标注和训练相结合的所有环节。
1.使用首批数据训先练一个模型;
2.用此模型预测新的一批数据并给出标签,此标签可能不精确;
3.人工修改上述标签,得到这批数据精确的标签;
4.把新数据和标签加入到原始训练样本集中;
5.重新训练一个新模型;
三、下载代码并配置环境
此fork版本的代码中包含本项目对predict.py的修改。
!git clone -b release/2.8 https://github.com/chunyuwei/PaddleSeg.git
正克隆到 'PaddleSeg'...
remote: Enumerating objects: 25123, done.[K
remote: Counting objects: 100% (7/7), done.[K
remote: Compressing objects: 100% (7/7), done.[K
remote: Total 25123 (delta 2), reused 2 (delta 0), pack-reused 25116[K
接收对象中: 100% (25123/25123), 348.83 MiB | 17.61 MiB/s, 完成.
处理 delta 中: 100% (16316/16316), 完成.
检查连接... 完成。
%cd ~/PaddleSeg
!pip install -r requirements.txt
!pip install opencv-python==4.5.5.64 -i https://mirror.baidu.com/pypi/simple
!pip uninstall paddleseg -y
!python setup.py build
!python setup.py install
/home/aistudio/PaddleSeg
Looking in indexes: https://pypi.tuna.tsinghua.edu.cn/simple
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[1m[[0m[34;49mnotice[0m[1;39;49m][0m[39;49m To update, run: [0m[32;49mpip install --upgrade pip[0m
Looking in indexes: https://mirror.baidu.com/pypi/simple
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[1m[[0m[34;49mnotice[0m[1;39;49m][0m[39;49m To update, run: [0m[32;49mpip install --upgrade pip[0m
Found existing installation: paddleseg 2.8.0
Uninstalling paddleseg-2.8.0:Successfully uninstalled paddleseg-2.8.0
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/matplotlib/__init__.py:107: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop workingfrom collections import MutableMapping
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/matplotlib/rcsetup.py:20: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop workingfrom collections import Iterable, Mapping
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/matplotlib/colors.py:53: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop workingfrom collections import Sized
running build
running build_py
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/matplotlib/__init__.py:107: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop workingfrom collections import MutableMapping
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/matplotlib/rcsetup.py:20: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop workingfrom collections import Iterable, Mapping
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/matplotlib/colors.py:53: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop workingfrom collections import Sized
running install
running bdist_egg
running egg_info
writing paddleseg.egg-info/PKG-INFO
writing dependency_links to paddleseg.egg-info/dependency_links.txt
writing requirements to paddleseg.egg-info/requires.txt
writing top-level names to paddleseg.egg-info/top_level.txt
adding license file 'LICENSE' (matched pattern 'LICEN[CS]E*')
reading manifest file 'paddleseg.egg-info/SOURCES.txt'
writing manifest file 'paddleseg.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/paddleseg
creating build/bdist.linux-x86_64/egg/paddleseg/optimizers
copying build/lib/paddleseg/optimizers/__init__.py -> build/bdist.linux-x86_64/egg/paddleseg/optimizers
copying build/lib/paddleseg/optimizers/custom_optimizers.py -> build/bdist.linux-x86_64/egg/paddleseg/optimizers
copying build/lib/paddleseg/optimizers/optimizer.py -> build/bdist.linux-x86_64/egg/paddleseg/optimizers
creating build/bdist.linux-x86_64/egg/paddleseg/deploy
copying build/lib/paddleseg/deploy/infer.py -> build/bdist.linux-x86_64/egg/paddleseg/deploy
copying build/lib/paddleseg/deploy/__init__.py -> build/bdist.linux-x86_64/egg/paddleseg/deploy
copying build/lib/paddleseg/deploy/export.py -> build/bdist.linux-x86_64/egg/paddleseg/deploy
creating build/bdist.linux-x86_64/egg/paddleseg/cvlibs
copying build/lib/paddleseg/cvlibs/config_checker.py -> build/bdist.linux-x86_64/egg/paddleseg/cvlibs
copying build/lib/paddleseg/cvlibs/manager.py -> build/bdist.linux-x86_64/egg/paddleseg/cvlibs
copying build/lib/paddleseg/cvlibs/config.py -> build/bdist.linux-x86_64/egg/paddleseg/cvlibs
copying build/lib/paddleseg/cvlibs/builder.py -> build/bdist.linux-x86_64/egg/paddleseg/cvlibs
copying build/lib/paddleseg/cvlibs/param_init.py -> build/bdist.linux-x86_64/egg/paddleseg/cvlibs
copying build/lib/paddleseg/cvlibs/__init__.py -> build/bdist.linux-x86_64/egg/paddleseg/cvlibs
copying build/lib/paddleseg/__init__.py -> build/bdist.linux-x86_64/egg/paddleseg
creating build/bdist.linux-x86_64/egg/paddleseg/models
copying build/lib/paddleseg/models/pp_mobileseg.py -> build/bdist.linux-x86_64/egg/paddleseg/models
creating build/bdist.linux-x86_64/egg/paddleseg/models/layers
copying build/lib/paddleseg/models/layers/nmf_2d.py -> build/bdist.linux-x86_64/egg/paddleseg/models/layers
copying build/lib/paddleseg/models/layers/ms_deformable_attention.py -> build/bdist.linux-x86_64/egg/paddleseg/models/layers
copying build/lib/paddleseg/models/layers/vit_adapter_layers.py -> build/bdist.linux-x86_64/egg/paddleseg/models/layers
copying build/lib/paddleseg/models/layers/polaried_self_attention.py -> build/bdist.linux-x86_64/egg/paddleseg/models/layers
copying build/lib/paddleseg/models/layers/tensor_fusion_helper.py -> build/bdist.linux-x86_64/egg/paddleseg/models/layers
copying build/lib/paddleseg/models/layers/layer_libs.py -> build/bdist.linux-x86_64/egg/paddleseg/models/layers
copying build/lib/paddleseg/models/layers/__init__.py -> build/bdist.linux-x86_64/egg/paddleseg/models/layers
copying build/lib/paddleseg/models/layers/pyramid_pool.py -> build/bdist.linux-x86_64/egg/paddleseg/models/layers
copying build/lib/paddleseg/models/layers/nonlocal2d.py -> build/bdist.linux-x86_64/egg/paddleseg/models/layers
copying build/lib/paddleseg/models/layers/wrap_functions.py -> build/bdist.linux-x86_64/egg/paddleseg/models/layers
copying build/lib/paddleseg/models/layers/activation.py -> build/bdist.linux-x86_64/egg/paddleseg/models/layers
copying build/lib/paddleseg/models/layers/tensor_fusion.py -> build/bdist.linux-x86_64/egg/paddleseg/models/layers
copying build/lib/paddleseg/models/layers/attention.py -> build/bdist.linux-x86_64/egg/paddleseg/models/layers
creating build/bdist.linux-x86_64/egg/paddleseg/models/losses
copying build/lib/paddleseg/models/losses/bootstrapped_cross_entropy.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
copying build/lib/paddleseg/models/losses/ohem_edge_attention_loss.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
copying build/lib/paddleseg/models/losses/point_cross_entropy_loss.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
copying build/lib/paddleseg/models/losses/dice_loss.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
copying build/lib/paddleseg/models/losses/focal_loss.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
copying build/lib/paddleseg/models/losses/decoupledsegnet_relax_boundary_loss.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
copying build/lib/paddleseg/models/losses/maskformer_loss.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
copying build/lib/paddleseg/models/losses/kl_loss.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
copying build/lib/paddleseg/models/losses/pixel_contrast_cross_entropy_loss.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
copying build/lib/paddleseg/models/losses/binary_cross_entropy_loss.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
copying build/lib/paddleseg/models/losses/semantic_encode_cross_entropy_loss.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
copying build/lib/paddleseg/models/losses/mean_square_error_loss.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
copying build/lib/paddleseg/models/losses/cross_entropy_loss.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
copying build/lib/paddleseg/models/losses/mixed_loss.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
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copying build/lib/paddleseg/models/losses/lovasz_loss.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
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copying build/lib/paddleseg/models/losses/__init__.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
copying build/lib/paddleseg/models/losses/ohem_cross_entropy_loss.py -> build/bdist.linux-x86_64/egg/paddleseg/models/losses
copying build/lib/paddleseg/models/lpsnet.py -> build/bdist.linux-x86_64/egg/paddleseg/models
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copying build/lib/paddleseg/models/espnetv1.py -> build/bdist.linux-x86_64/egg/paddleseg/models
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copying build/lib/paddleseg/models/upernet.py -> build/bdist.linux-x86_64/egg/paddleseg/models
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copying build/lib/paddleseg/models/dnlnet.py -> build/bdist.linux-x86_64/egg/paddleseg/models
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copying build/lib/paddleseg/models/backbones/stdcnet.py -> build/bdist.linux-x86_64/egg/paddleseg/models/backbones
copying build/lib/paddleseg/models/backbones/mobilenetv2.py -> build/bdist.linux-x86_64/egg/paddleseg/models/backbones
copying build/lib/paddleseg/models/backbones/__init__.py -> build/bdist.linux-x86_64/egg/paddleseg/models/backbones
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copying build/lib/paddleseg/models/backbones/hrnet.py -> build/bdist.linux-x86_64/egg/paddleseg/models/backbones
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copying build/lib/paddleseg/models/mobileseg.py -> build/bdist.linux-x86_64/egg/paddleseg/models
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copying build/lib/paddleseg/models/bisenet.py -> build/bdist.linux-x86_64/egg/paddleseg/models
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copying build/lib/paddleseg/models/knet.py -> build/bdist.linux-x86_64/egg/paddleseg/models
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copying build/lib/paddleseg/models/upernet_vit_adapter.py -> build/bdist.linux-x86_64/egg/paddleseg/models
creating build/bdist.linux-x86_64/egg/paddleseg/transforms
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copying build/lib/paddleseg/utils/__init__.py -> build/bdist.linux-x86_64/egg/paddleseg/utils
copying build/lib/paddleseg/utils/progbar.py -> build/bdist.linux-x86_64/egg/paddleseg/utils
copying build/lib/paddleseg/utils/op_flops_funs.py -> build/bdist.linux-x86_64/egg/paddleseg/utils
copying build/lib/paddleseg/utils/ema.py -> build/bdist.linux-x86_64/egg/paddleseg/utils
copying build/lib/paddleseg/utils/download.py -> build/bdist.linux-x86_64/egg/paddleseg/utils
copying build/lib/paddleseg/utils/metrics.py -> build/bdist.linux-x86_64/egg/paddleseg/utils
copying build/lib/paddleseg/utils/utils.py -> build/bdist.linux-x86_64/egg/paddleseg/utils
copying build/lib/paddleseg/utils/train_profiler.py -> build/bdist.linux-x86_64/egg/paddleseg/utils
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copying build/lib/paddleseg/utils/env/seg_env.py -> build/bdist.linux-x86_64/egg/paddleseg/utils/env
copying build/lib/paddleseg/utils/env/sys_env.py -> build/bdist.linux-x86_64/egg/paddleseg/utils/env
copying build/lib/paddleseg/utils/logger.py -> build/bdist.linux-x86_64/egg/paddleseg/utils
creating build/bdist.linux-x86_64/egg/paddleseg/core
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copying build/lib/paddleseg/core/val.py -> build/bdist.linux-x86_64/egg/paddleseg/core
copying build/lib/paddleseg/core/train.py -> build/bdist.linux-x86_64/egg/paddleseg/core
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copying build/lib/paddleseg/datasets/optic_disc_seg.py -> build/bdist.linux-x86_64/egg/paddleseg/datasets
copying build/lib/paddleseg/datasets/mini_deep_globe_road_extraction.py -> build/bdist.linux-x86_64/egg/paddleseg/datasets
copying build/lib/paddleseg/datasets/__init__.py -> build/bdist.linux-x86_64/egg/paddleseg/datasets
copying build/lib/paddleseg/datasets/dataset.py -> build/bdist.linux-x86_64/egg/paddleseg/datasets
copying build/lib/paddleseg/datasets/hrf.py -> build/bdist.linux-x86_64/egg/paddleseg/datasets
copying build/lib/paddleseg/datasets/ade.py -> build/bdist.linux-x86_64/egg/paddleseg/datasets
copying build/lib/paddleseg/datasets/pssl.py -> build/bdist.linux-x86_64/egg/paddleseg/datasets
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byte-compiling build/bdist.linux-x86_64/egg/paddleseg/optimizers/__init__.py to __init__.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/optimizers/custom_optimizers.py to custom_optimizers.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/optimizers/optimizer.py to optimizer.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/deploy/infer.py to infer.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/deploy/__init__.py to __init__.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/deploy/export.py to export.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/cvlibs/config_checker.py to config_checker.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/cvlibs/manager.py to manager.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/cvlibs/config.py to config.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/cvlibs/builder.py to builder.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/cvlibs/param_init.py to param_init.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/cvlibs/__init__.py to __init__.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/__init__.py to __init__.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/pp_mobileseg.py to pp_mobileseg.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/layers/nmf_2d.py to nmf_2d.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/layers/ms_deformable_attention.py to ms_deformable_attention.cpython-37.pyc
build/bdist.linux-x86_64/egg/paddleseg/models/layers/ms_deformable_attention.py:107: DeprecationWarning: invalid escape sequence \s"""
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/layers/vit_adapter_layers.py to vit_adapter_layers.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/layers/polaried_self_attention.py to polaried_self_attention.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/layers/tensor_fusion_helper.py to tensor_fusion_helper.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/layers/layer_libs.py to layer_libs.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/layers/__init__.py to __init__.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/layers/pyramid_pool.py to pyramid_pool.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/layers/nonlocal2d.py to nonlocal2d.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/layers/wrap_functions.py to wrap_functions.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/layers/activation.py to activation.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/layers/tensor_fusion.py to tensor_fusion.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/layers/attention.py to attention.cpython-37.pyc
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byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/losses/ohem_edge_attention_loss.py to ohem_edge_attention_loss.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/losses/point_cross_entropy_loss.py to point_cross_entropy_loss.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/losses/dice_loss.py to dice_loss.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/losses/focal_loss.py to focal_loss.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/losses/decoupledsegnet_relax_boundary_loss.py to decoupledsegnet_relax_boundary_loss.cpython-37.pyc
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byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/losses/pixel_contrast_cross_entropy_loss.py to pixel_contrast_cross_entropy_loss.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/losses/binary_cross_entropy_loss.py to binary_cross_entropy_loss.cpython-37.pyc
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byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/losses/cross_entropy_loss.py to cross_entropy_loss.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/losses/mixed_loss.py to mixed_loss.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/losses/edge_attention_loss.py to edge_attention_loss.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/losses/detail_aggregate_loss.py to detail_aggregate_loss.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/losses/l1_loss.py to l1_loss.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/losses/gscnn_dual_task_loss.py to gscnn_dual_task_loss.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/losses/lovasz_loss.py to lovasz_loss.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/losses/rmi_loss.py to rmi_loss.cpython-37.pyc
build/bdist.linux-x86_64/egg/paddleseg/models/losses/rmi_loss.py:78: DeprecationWarning: invalid escape sequence \i"""
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/models/losses/semantic_connectivity_loss.py to semantic_connectivity_loss.cpython-37.pyc
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byte-compiling build/bdist.linux-x86_64/egg/paddleseg/utils/timer.py to timer.cpython-37.pyc
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byte-compiling build/bdist.linux-x86_64/egg/paddleseg/utils/utils.py to utils.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/utils/train_profiler.py to train_profiler.cpython-37.pyc
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byte-compiling build/bdist.linux-x86_64/egg/paddleseg/utils/env/seg_env.py to seg_env.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/utils/env/sys_env.py to sys_env.cpython-37.pyc
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byte-compiling build/bdist.linux-x86_64/egg/paddleseg/core/__init__.py to __init__.cpython-37.pyc
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byte-compiling build/bdist.linux-x86_64/egg/paddleseg/core/predict.py to predict.cpython-37.pyc
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byte-compiling build/bdist.linux-x86_64/egg/paddleseg/datasets/chase_db1.py to chase_db1.cpython-37.pyc
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byte-compiling build/bdist.linux-x86_64/egg/paddleseg/datasets/cityscapes.py to cityscapes.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/datasets/voc.py to voc.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/datasets/optic_disc_seg.py to optic_disc_seg.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/datasets/mini_deep_globe_road_extraction.py to mini_deep_globe_road_extraction.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/paddleseg/datasets/__init__.py to __init__.cpython-37.pyc
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byte-compiling build/bdist.linux-x86_64/egg/paddleseg/datasets/pp_humanseg14k.py to pp_humanseg14k.cpython-37.pyc
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying paddleseg.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying paddleseg.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying paddleseg.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying paddleseg.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying paddleseg.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
zip_safe flag not set; analyzing archive contents...
creating 'dist/paddleseg-2.8.0-py3.7.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing paddleseg-2.8.0-py3.7.egg
Copying paddleseg-2.8.0-py3.7.egg to /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Adding paddleseg 2.8.0 to easy-install.pth fileInstalled /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddleseg-2.8.0-py3.7.egg
Processing dependencies for paddleseg==2.8.0
Searching for EISeg==1.1.1
Best match: EISeg 1.1.1
Adding EISeg 1.1.1 to easy-install.pth file
Installing eiseg script to /opt/conda/envs/python35-paddle120-env/binUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for scikit-learn==0.24.2
Best match: scikit-learn 0.24.2
Adding scikit-learn 0.24.2 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for prettytable==0.7.2
Best match: prettytable 0.7.2
Adding prettytable 0.7.2 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for scipy==1.6.3
Best match: scipy 1.6.3
Adding scipy 1.6.3 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for filelock==3.0.12
Best match: filelock 3.0.12
Adding filelock 3.0.12 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for tqdm==4.27.0
Best match: tqdm 4.27.0
Adding tqdm 4.27.0 to easy-install.pth file
Installing tqdm script to /opt/conda/envs/python35-paddle120-env/binUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for opencv-python==4.5.5.64
Best match: opencv-python 4.5.5.64
Adding opencv-python 4.5.5.64 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for visualdl==2.4.0
Best match: visualdl 2.4.0
Adding visualdl 2.4.0 to easy-install.pth file
Installing visualdl script to /opt/conda/envs/python35-paddle120-env/binUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for PyYAML==5.1.2
Best match: PyYAML 5.1.2
Adding PyYAML 5.1.2 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for requests==2.24.0
Best match: requests 2.24.0
Adding requests 2.24.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for PyQt5==5.15.9
Best match: PyQt5 5.15.9
Adding PyQt5 5.15.9 to easy-install.pth file
Installing pylupdate5 script to /opt/conda/envs/python35-paddle120-env/bin
Installing pyrcc5 script to /opt/conda/envs/python35-paddle120-env/bin
Installing pyuic5 script to /opt/conda/envs/python35-paddle120-env/binUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for QtPy==2.3.1
Best match: QtPy 2.3.1
Adding QtPy 2.3.1 to easy-install.pth file
Installing qtpy script to /opt/conda/envs/python35-paddle120-env/binUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for easydict==1.9
Best match: easydict 1.9
Adding easydict 1.9 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for scikit-image==0.19.3
Best match: scikit-image 0.19.3
Adding scikit-image 0.19.3 to easy-install.pth file
Installing skivi script to /opt/conda/envs/python35-paddle120-env/binUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for wget==3.2
Best match: wget 3.2
Adding wget 3.2 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for albumentations==1.3.0
Best match: albumentations 1.3.0
Adding albumentations 1.3.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for protobuf==3.20.0
Best match: protobuf 3.20.0
Adding protobuf 3.20.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for Cython==0.29
Best match: Cython 0.29
Adding Cython 0.29 to easy-install.pth file
Installing cygdb script to /opt/conda/envs/python35-paddle120-env/bin
Installing cython script to /opt/conda/envs/python35-paddle120-env/bin
Installing cythonize script to /opt/conda/envs/python35-paddle120-env/binUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for joblib==0.14.1
Best match: joblib 0.14.1
Adding joblib 0.14.1 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for threadpoolctl==2.1.0
Best match: threadpoolctl 2.1.0
Adding threadpoolctl 2.1.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for numpy==1.19.5
Best match: numpy 1.19.5
Adding numpy 1.19.5 to easy-install.pth file
Installing f2py script to /opt/conda/envs/python35-paddle120-env/bin
Installing f2py3 script to /opt/conda/envs/python35-paddle120-env/bin
Installing f2py3.7 script to /opt/conda/envs/python35-paddle120-env/binUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for Flask==1.1.1
Best match: Flask 1.1.1
Adding Flask 1.1.1 to easy-install.pth file
Installing flask script to /opt/conda/envs/python35-paddle120-env/binUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for six==1.16.0
Best match: six 1.16.0
Adding six 1.16.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for matplotlib==2.2.3
Best match: matplotlib 2.2.3
Adding matplotlib 2.2.3 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for Flask-Babel==1.0.0
Best match: Flask-Babel 1.0.0
Adding Flask-Babel 1.0.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for Pillow==8.2.0
Best match: Pillow 8.2.0
Adding Pillow 8.2.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for bce-python-sdk==0.8.53
Best match: bce-python-sdk 0.8.53
Adding bce-python-sdk 0.8.53 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for pandas==1.1.5
Best match: pandas 1.1.5
Adding pandas 1.1.5 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for idna==2.8
Best match: idna 2.8
Adding idna 2.8 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for chardet==3.0.4
Best match: chardet 3.0.4
Adding chardet 3.0.4 to easy-install.pth file
Installing chardetect script to /opt/conda/envs/python35-paddle120-env/binUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for certifi==2019.9.11
Best match: certifi 2019.9.11
Adding certifi 2019.9.11 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for urllib3==1.25.6
Best match: urllib3 1.25.6
Adding urllib3 1.25.6 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for PyQt5-sip==12.12.0
Best match: PyQt5-sip 12.12.0
Adding PyQt5-sip 12.12.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for PyQt5-Qt5==5.15.2
Best match: PyQt5-Qt5 5.15.2
Adding PyQt5-Qt5 5.15.2 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for packaging==21.3
Best match: packaging 21.3
Adding packaging 21.3 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for networkx==2.4
Best match: networkx 2.4
Adding networkx 2.4 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for tifffile==2021.11.2
Best match: tifffile 2021.11.2
Adding tifffile 2021.11.2 to easy-install.pth file
Installing lsm2bin script to /opt/conda/envs/python35-paddle120-env/bin
Installing tiff2fsspec script to /opt/conda/envs/python35-paddle120-env/bin
Installing tiffcomment script to /opt/conda/envs/python35-paddle120-env/bin
Installing tifffile script to /opt/conda/envs/python35-paddle120-env/binUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for PyWavelets==1.3.0
Best match: PyWavelets 1.3.0
Adding PyWavelets 1.3.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for imageio==2.6.1
Best match: imageio 2.6.1
Adding imageio 2.6.1 to easy-install.pth file
Installing imageio_download_bin script to /opt/conda/envs/python35-paddle120-env/bin
Installing imageio_remove_bin script to /opt/conda/envs/python35-paddle120-env/binUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for qudida==0.0.4
Best match: qudida 0.0.4
Adding qudida 0.0.4 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for opencv-python-headless==4.7.0.72
Best match: opencv-python-headless 4.7.0.72
Adding opencv-python-headless 4.7.0.72 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for Jinja2==3.0.0
Best match: Jinja2 3.0.0
Adding Jinja2 3.0.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for itsdangerous==1.1.0
Best match: itsdangerous 1.1.0
Adding itsdangerous 1.1.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for Werkzeug==0.16.0
Best match: Werkzeug 0.16.0
Adding Werkzeug 0.16.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for Click==7.0
Best match: Click 7.0
Adding Click 7.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for pytz==2019.3
Best match: pytz 2019.3
Adding pytz 2019.3 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for cycler==0.10.0
Best match: cycler 0.10.0
Adding cycler 0.10.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for python-dateutil==2.8.2
Best match: python-dateutil 2.8.2
Adding python-dateutil 2.8.2 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for kiwisolver==1.1.0
Best match: kiwisolver 1.1.0
Adding kiwisolver 1.1.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for pyparsing==3.0.9
Best match: pyparsing 3.0.9
Adding pyparsing 3.0.9 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for Babel==2.8.0
Best match: Babel 2.8.0
Adding Babel 2.8.0 to easy-install.pth file
Installing pybabel script to /opt/conda/envs/python35-paddle120-env/binUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for pycryptodome==3.9.9
Best match: pycryptodome 3.9.9
Adding pycryptodome 3.9.9 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for future==0.18.0
Best match: future 0.18.0
Adding future 0.18.0 to easy-install.pth file
Installing futurize script to /opt/conda/envs/python35-paddle120-env/bin
Installing pasteurize script to /opt/conda/envs/python35-paddle120-env/binUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for decorator==4.4.2
Best match: decorator 4.4.2
Adding decorator 4.4.2 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for typing-extensions==4.3.0
Best match: typing-extensions 4.3.0
Adding typing-extensions 4.3.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for MarkupSafe==2.0.1
Best match: MarkupSafe 2.0.1
Adding MarkupSafe 2.0.1 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Searching for setuptools==56.2.0
Best match: setuptools 56.2.0
Adding setuptools 56.2.0 to easy-install.pth fileUsing /opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages
Finished processing dependencies for paddleseg==2.8.0
四、准备数据
使用标注工具PaddleSeg或者lableme标注了一批数据;
假设已经有了眼底数据集,https://paddleseg.bj.bcebos.com/dataset/optic_disc_seg.zip
数据集内容如下:
并将此数据集放入PaddleSeg/data中,以备使用。
%cd /home/aistudio
!ls
!unzip data/data209770/optic_disc_seg.zip
!mkdir -p PaddleSeg/data
!mv optic_disc_seg PaddleSeg/data/
!mv optic_disc_seg_add PaddleSeg/data/
!mv optic_disc_seg_new PaddleSeg/data/
!mv optic_disc_seg_test PaddleSeg/data/
inflating: optic_disc_seg/JPEGImages/N0159.jpg inflating: optic_disc_seg/JPEGImages/N0160.jpg inflating: optic_disc_seg/JPEGImages/N0161.jpg inflating: optic_disc_seg/JPEGImages/P0001.jpg inflating: optic_disc_seg/JPEGImages/P0002.jpg inflating: optic_disc_seg/JPEGImages/P0003.jpg inflating: optic_disc_seg/JPEGImages/P0004.jpg inflating: optic_disc_seg/JPEGImages/P0005.jpg inflating: optic_disc_seg/JPEGImages/P0006.jpg inflating: optic_disc_seg/JPEGImages/P0007.jpg inflating: optic_disc_seg/JPEGImages/P0008.jpg inflating: optic_disc_seg/JPEGImages/P0009.jpg inflating: optic_disc_seg/JPEGImages/P0010.jpg inflating: optic_disc_seg/JPEGImages/P0011.jpg inflating: optic_disc_seg/JPEGImages/P0012.jpg inflating: optic_disc_seg/JPEGImages/P0013.jpg inflating: optic_disc_seg/JPEGImages/P0014.jpg inflating: optic_disc_seg/JPEGImages/P0015.jpg inflating: optic_disc_seg/JPEGImages/P0016.jpg inflating: optic_disc_seg/JPEGImages/P0018.jpg inflating: optic_disc_seg/JPEGImages/P0019.jpg inflating: optic_disc_seg/JPEGImages/P0020.jpg inflating: optic_disc_seg/JPEGImages/P0021.jpg inflating: optic_disc_seg/JPEGImages/P0022.jpg inflating: optic_disc_seg/JPEGImages/P0023.jpg inflating: optic_disc_seg/JPEGImages/P0024.jpg inflating: optic_disc_seg/JPEGImages/P0025.jpg inflating: optic_disc_seg/JPEGImages/P0026.jpg inflating: optic_disc_seg/JPEGImages/P0028.jpg inflating: optic_disc_seg/JPEGImages/P0029.jpg inflating: optic_disc_seg/JPEGImages/P0030.jpg inflating: optic_disc_seg/JPEGImages/P0031.jpg inflating: optic_disc_seg/JPEGImages/P0032.jpg inflating: optic_disc_seg/JPEGImages/P0033.jpg inflating: optic_disc_seg/JPEGImages/P0034.jpg inflating: optic_disc_seg/JPEGImages/P0035.jpg inflating: optic_disc_seg/JPEGImages/P0036.jpg inflating: optic_disc_seg/JPEGImages/P0037.jpg inflating: optic_disc_seg/JPEGImages/P0038.jpg inflating: optic_disc_seg/JPEGImages/P0039.jpg inflating: optic_disc_seg/JPEGImages/P0040.jpg inflating: optic_disc_seg/JPEGImages/P0041.jpg inflating: optic_disc_seg/JPEGImages/P0042.jpg inflating: optic_disc_seg/JPEGImages/P0043.jpg inflating: optic_disc_seg/JPEGImages/P0044.jpg inflating: optic_disc_seg/JPEGImages/P0045.jpg inflating: optic_disc_seg/JPEGImages/P0046.jpg inflating: optic_disc_seg/JPEGImages/P0047.jpg inflating: optic_disc_seg/JPEGImages/P0048.jpg inflating: optic_disc_seg/JPEGImages/P0049.jpg inflating: optic_disc_seg/JPEGImages/P0050.jpg inflating: optic_disc_seg/JPEGImages/P0051.jpg inflating: optic_disc_seg/JPEGImages/P0052.jpg inflating: optic_disc_seg/JPEGImages/P0053.jpg inflating: optic_disc_seg/JPEGImages/P0054.jpg inflating: optic_disc_seg/JPEGImages/P0055.jpg inflating: optic_disc_seg/JPEGImages/P0056.jpg inflating: optic_disc_seg/JPEGImages/P0057.jpg inflating: optic_disc_seg/JPEGImages/P0058.jpg inflating: optic_disc_seg/JPEGImages/P0059.jpg inflating: optic_disc_seg/JPEGImages/P0060.jpg inflating: optic_disc_seg/JPEGImages/P0061.jpg inflating: optic_disc_seg/JPEGImages/P0063.jpg inflating: optic_disc_seg/JPEGImages/P0064.jpg inflating: optic_disc_seg/JPEGImages/P0065.jpg inflating: optic_disc_seg/JPEGImages/P0066.jpg inflating: optic_disc_seg/JPEGImages/P0067.jpg inflating: optic_disc_seg/JPEGImages/P0068.jpg inflating: optic_disc_seg/JPEGImages/P0069.jpg inflating: optic_disc_seg/JPEGImages/P0070.jpg inflating: optic_disc_seg/JPEGImages/P0071.jpg inflating: optic_disc_seg/JPEGImages/P0072.jpg inflating: optic_disc_seg/JPEGImages/P0073.jpg inflating: optic_disc_seg/JPEGImages/P0074.jpg inflating: optic_disc_seg/JPEGImages/P0075.jpg inflating: optic_disc_seg/JPEGImages/P0077.jpg inflating: optic_disc_seg/JPEGImages/P0079.jpg inflating: optic_disc_seg/JPEGImages/P0081.jpg inflating: optic_disc_seg/JPEGImages/P0082.jpg inflating: optic_disc_seg/JPEGImages/P0083.jpg inflating: optic_disc_seg/JPEGImages/P0084.jpg inflating: optic_disc_seg/JPEGImages/P0085.jpg inflating: optic_disc_seg/JPEGImages/P0086.jpg inflating: optic_disc_seg/JPEGImages/P0087.jpg inflating: optic_disc_seg/JPEGImages/P0088.jpg inflating: optic_disc_seg/JPEGImages/P0089.jpg inflating: optic_disc_seg/JPEGImages/P0090.jpg inflating: optic_disc_seg/JPEGImages/P0091.jpg inflating: optic_disc_seg/JPEGImages/P0092.jpg inflating: optic_disc_seg/JPEGImages/P0093.jpg inflating: optic_disc_seg/JPEGImages/P0094.jpg inflating: optic_disc_seg/JPEGImages/P0095.jpg inflating: optic_disc_seg/JPEGImages/P0096.jpg inflating: optic_disc_seg/JPEGImages/P0097.jpg inflating: optic_disc_seg/JPEGImages/P0098.jpg inflating: optic_disc_seg/JPEGImages/P0099.jpg inflating: optic_disc_seg/JPEGImages/P0101.jpg inflating: optic_disc_seg/JPEGImages/P0102.jpg inflating: optic_disc_seg/JPEGImages/P0104.jpg inflating: optic_disc_seg/JPEGImages/P0105.jpg inflating: optic_disc_seg/JPEGImages/P0106.jpg inflating: optic_disc_seg/JPEGImages/P0107.jpg inflating: optic_disc_seg/JPEGImages/P0108.jpg inflating: optic_disc_seg/JPEGImages/P0109.jpg inflating: optic_disc_seg/JPEGImages/P0110.jpg inflating: optic_disc_seg/JPEGImages/P0111.jpg inflating: optic_disc_seg/JPEGImages/P0112.jpg inflating: optic_disc_seg/JPEGImages/P0113.jpg inflating: optic_disc_seg/JPEGImages/P0114.jpg inflating: optic_disc_seg/JPEGImages/P0118.jpg inflating: optic_disc_seg/JPEGImages/P0119.jpg inflating: optic_disc_seg/JPEGImages/P0120.jpg inflating: optic_disc_seg/JPEGImages/P0121.jpg inflating: optic_disc_seg/JPEGImages/P0122.jpg inflating: optic_disc_seg/JPEGImages/P0123.jpg inflating: optic_disc_seg/JPEGImages/P0124.jpg inflating: optic_disc_seg/JPEGImages/P0125.jpg inflating: optic_disc_seg/JPEGImages/P0126.jpg inflating: optic_disc_seg/JPEGImages/P0127.jpg inflating: optic_disc_seg/JPEGImages/P0128.jpg inflating: optic_disc_seg/JPEGImages/P0129.jpg inflating: optic_disc_seg/JPEGImages/P0130.jpg inflating: optic_disc_seg/JPEGImages/P0131.jpg inflating: optic_disc_seg/JPEGImages/P0132.jpg inflating: optic_disc_seg/JPEGImages/P0133.jpg inflating: optic_disc_seg/JPEGImages/P0134.jpg inflating: optic_disc_seg/JPEGImages/P0135.jpg inflating: optic_disc_seg/JPEGImages/P0136.jpg inflating: optic_disc_seg/JPEGImages/P0137.jpg inflating: optic_disc_seg/JPEGImages/P0139.jpg inflating: optic_disc_seg/JPEGImages/P0140.jpg inflating: optic_disc_seg/JPEGImages/P0141.jpg inflating: optic_disc_seg/JPEGImages/P0142.jpg inflating: optic_disc_seg/JPEGImages/P0143.jpg inflating: optic_disc_seg/JPEGImages/P0144.jpg inflating: optic_disc_seg/JPEGImages/P0145.jpg inflating: optic_disc_seg/JPEGImages/P0146.jpg inflating: optic_disc_seg/JPEGImages/P0147.jpg inflating: optic_disc_seg/JPEGImages/P0148.jpg inflating: optic_disc_seg/JPEGImages/P0149.jpg inflating: optic_disc_seg/JPEGImages/P0150.jpg inflating: optic_disc_seg/JPEGImages/P0151.jpg inflating: optic_disc_seg/JPEGImages/P0152.jpg inflating: optic_disc_seg/JPEGImages/P0153.jpg inflating: optic_disc_seg/JPEGImages/P0154.jpg inflating: optic_disc_seg/JPEGImages/P0157.jpg inflating: optic_disc_seg/JPEGImages/P0158.jpg inflating: optic_disc_seg/JPEGImages/P0159.jpg inflating: optic_disc_seg/JPEGImages/P0160.jpg inflating: optic_disc_seg/JPEGImages/P0161.jpg inflating: optic_disc_seg/JPEGImages/P0162.jpg inflating: optic_disc_seg/JPEGImages/P0164.jpg inflating: optic_disc_seg/JPEGImages/P0165.jpg inflating: optic_disc_seg/JPEGImages/P0166.jpg inflating: optic_disc_seg/JPEGImages/P0167.jpg inflating: optic_disc_seg/JPEGImages/P0168.jpg inflating: optic_disc_seg/JPEGImages/P0169.jpg inflating: optic_disc_seg/JPEGImages/P0170.jpg inflating: optic_disc_seg/JPEGImages/P0171.jpg inflating: optic_disc_seg/JPEGImages/P0172.jpg inflating: optic_disc_seg/JPEGImages/P0173.jpg inflating: optic_disc_seg/JPEGImages/P0174.jpg inflating: optic_disc_seg/JPEGImages/P0175.jpg inflating: optic_disc_seg/JPEGImages/P0176.jpg inflating: optic_disc_seg/JPEGImages/P0177.jpg inflating: optic_disc_seg/JPEGImages/P0178.jpg inflating: optic_disc_seg/JPEGImages/P0179.jpg inflating: optic_disc_seg/JPEGImages/P0180.jpg inflating: optic_disc_seg/JPEGImages/P0181.jpg inflating: optic_disc_seg/JPEGImages/P0182.jpg inflating: optic_disc_seg/JPEGImages/P0183.jpg inflating: optic_disc_seg/JPEGImages/P0184.jpg inflating: optic_disc_seg/JPEGImages/P0185.jpg inflating: optic_disc_seg/JPEGImages/P0186.jpg inflating: optic_disc_seg/JPEGImages/P0187.jpg inflating: optic_disc_seg/JPEGImages/P0188.jpg inflating: optic_disc_seg/JPEGImages/P0189.jpg inflating: optic_disc_seg/JPEGImages/P0190.jpg inflating: optic_disc_seg/JPEGImages/P0191.jpg inflating: optic_disc_seg/JPEGImages/P0192.jpg inflating: optic_disc_seg/JPEGImages/P0193.jpg inflating: optic_disc_seg/JPEGImages/P0194.jpg inflating: optic_disc_seg/JPEGImages/P0195.jpg inflating: optic_disc_seg/JPEGImages/P0196.jpg inflating: optic_disc_seg/JPEGImages/P0197.jpg inflating: optic_disc_seg/JPEGImages/P0198.jpg inflating: optic_disc_seg/JPEGImages/P0199.jpg inflating: optic_disc_seg/JPEGImages/P0200.jpg inflating: optic_disc_seg/JPEGImages/P0201.jpg inflating: optic_disc_seg/JPEGImages/P0202.jpg inflating: optic_disc_seg/JPEGImages/P0203.jpg inflating: optic_disc_seg/JPEGImages/P0204.jpg inflating: optic_disc_seg/JPEGImages/P0205.jpg inflating: optic_disc_seg/JPEGImages/P0206.jpg inflating: optic_disc_seg/JPEGImages/P0207.jpg inflating: optic_disc_seg/JPEGImages/P0208.jpg inflating: optic_disc_seg/JPEGImages/P0209.jpg inflating: optic_disc_seg/JPEGImages/P0210.jpg inflating: optic_disc_seg/JPEGImages/P0211.jpg inflating: optic_disc_seg/JPEGImages/P0212.jpg inflating: optic_disc_seg/JPEGImages/P0213.jpg extracting: optic_disc_seg/labels.txt inflating: optic_disc_seg/test_list.txt inflating: optic_disc_seg/train_list.txt inflating: optic_disc_seg/val_list.txt creating: optic_disc_seg_add/inflating: optic_disc_seg_add/H0002t.jpg inflating: optic_disc_seg_add/H0009t.jpg inflating: optic_disc_seg_add/H0016t.jpg creating: optic_disc_seg_add/label/inflating: optic_disc_seg_add/label/H0002t.png inflating: optic_disc_seg_add/label/H0002t_cutout.png inflating: optic_disc_seg_add/label/H0002t_pseudo.png inflating: optic_disc_seg_add/label/H0009t.png inflating: optic_disc_seg_add/label/H0009t_cutout.png inflating: optic_disc_seg_add/label/H0009t_pseudo.png inflating: optic_disc_seg_add/label/H0016t.png inflating: optic_disc_seg_add/label/H0016t_cutout.png inflating: optic_disc_seg_add/label/H0016t_pseudo.png inflating: optic_disc_seg_add/label/annotations.json creating: optic_disc_seg_new/creating: optic_disc_seg_new/Annotations/inflating: optic_disc_seg_new/Annotations/H0002.png inflating: optic_disc_seg_new/Annotations/H0002t_pseudo.png inflating: optic_disc_seg_new/Annotations/H0003.png inflating: optic_disc_seg_new/Annotations/H0005.png inflating: optic_disc_seg_new/Annotations/H0006.png inflating: optic_disc_seg_new/Annotations/H0007.png inflating: optic_disc_seg_new/Annotations/H0008.png inflating: optic_disc_seg_new/Annotations/H0009.png inflating: optic_disc_seg_new/Annotations/H0009t_pseudo.png inflating: optic_disc_seg_new/Annotations/H0010.png inflating: optic_disc_seg_new/Annotations/H0011.png inflating: optic_disc_seg_new/Annotations/H0012.png inflating: optic_disc_seg_new/Annotations/H0014.png inflating: optic_disc_seg_new/Annotations/H0015.png inflating: optic_disc_seg_new/Annotations/H0016.png inflating: optic_disc_seg_new/Annotations/H0016t_pseudo.png inflating: optic_disc_seg_new/Annotations/H0017.png inflating: optic_disc_seg_new/Annotations/H0018.png inflating: optic_disc_seg_new/Annotations/H0019.png inflating: optic_disc_seg_new/Annotations/H0020.png inflating: optic_disc_seg_new/Annotations/H0021.png inflating: optic_disc_seg_new/Annotations/H0022.png inflating: optic_disc_seg_new/Annotations/H0023.png inflating: optic_disc_seg_new/Annotations/H0024.png inflating: optic_disc_seg_new/Annotations/H0025.png inflating: optic_disc_seg_new/Annotations/N0001.png inflating: optic_disc_seg_new/Annotations/N0002.png inflating: optic_disc_seg_new/Annotations/N0003.png inflating: 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inflating: optic_disc_seg_new/test_list.txt inflating: optic_disc_seg_new/train_list.txt inflating: optic_disc_seg_new/val_list.txt creating: optic_disc_seg_test/inflating: optic_disc_seg_test/H0002t.jpg inflating: optic_disc_seg_test/H0009t.jpg inflating: optic_disc_seg_test/H0016t.jpg
五、训练
使用PaddleSeg训练出一版模型v1.0;
%cd /home/aistudio/PaddleSeg
!ls
!python tools/train.py --config configs/quick_start/pp_liteseg_optic_disc_512x512_1k.yml --save_interval 500 --do_eval --use_vdl --save_dir output
/home/aistudio/PaddleSeg
build deploy LICENSE paddleseg.egg-info requirements.txt tools
configs dist Matting README_CN.md setup.py
contrib docs output README_EN.md tests
data EISeg paddleseg README.md test_tipc
2023-04-17 14:55:11 [WARNING] Add the `num_classes` in train_dataset and val_dataset config to model config. We suggest you manually set `num_classes` in model config.
2023-04-17 14:55:11 [INFO]
------------Environment Information-------------
platform: Linux-4.15.0-140-generic-x86_64-with-debian-stretch-sid
Python: 3.7.4 (default, Aug 13 2019, 20:35:49) [GCC 7.3.0]
Paddle compiled with cuda: True
NVCC: Build cuda_11.2.r11.2/compiler.29618528_0
cudnn: 8.2
GPUs used: 1
CUDA_VISIBLE_DEVICES: None
GPU: ['GPU 0: Tesla V100-SXM2-16GB']
GCC: gcc (Ubuntu 7.5.0-3ubuntu1~16.04) 7.5.0
PaddleSeg: 2.8.0
PaddlePaddle: 2.3.2
OpenCV: 4.5.5
------------------------------------------------
2023-04-17 14:55:11 [INFO]
---------------Config Information---------------
batch_size: 4
iters: 1000
train_dataset:dataset_root: data/optic_disc_segmode: trainnum_classes: 2train_path: data/optic_disc_seg/train_list.txttransforms:- max_scale_factor: 2.0min_scale_factor: 0.5scale_step_size: 0.25type: ResizeStepScaling- crop_size:- 512- 512type: RandomPaddingCrop- type: RandomHorizontalFlip- brightness_range: 0.5contrast_range: 0.5saturation_range: 0.5type: RandomDistort- type: Normalizetype: Dataset
val_dataset:dataset_root: data/optic_disc_segmode: valnum_classes: 2transforms:- type: Normalizetype: Datasetval_path: data/optic_disc_seg/val_list.txt
optimizer:momentum: 0.9type: SGDweight_decay: 4.0e-05
lr_scheduler:end_lr: 0learning_rate: 0.01power: 0.9type: PolynomialDecay
loss:coef:- 1- 1- 1types:- type: CrossEntropyLoss- type: CrossEntropyLoss- type: CrossEntropyLoss
model:backbone:pretrained: https://bj.bcebos.com/paddleseg/dygraph/PP_STDCNet2.tar.gztype: STDC2num_classes: 2type: PPLiteSeg
------------------------------------------------2023-04-17 14:55:11 [INFO] Set device: gpu
2023-04-17 14:55:11 [INFO] Use the following config to build model
model:backbone:pretrained: https://bj.bcebos.com/paddleseg/dygraph/PP_STDCNet2.tar.gztype: STDC2num_classes: 2type: PPLiteSeg
W0417 14:55:11.513504 704 gpu_resources.cc:61] Please NOTE: device: 0, GPU Compute Capability: 7.0, Driver API Version: 11.2, Runtime API Version: 11.2
W0417 14:55:11.513561 704 gpu_resources.cc:91] device: 0, cuDNN Version: 8.2.
2023-04-17 14:55:14 [INFO] Loading pretrained model from https://bj.bcebos.com/paddleseg/dygraph/PP_STDCNet2.tar.gz
Connecting to https://bj.bcebos.com/paddleseg/dygraph/PP_STDCNet2.tar.gz
Downloading PP_STDCNet2.tar.gz
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Uncompress PP_STDCNet2.tar.gz
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2023-04-17 14:56:42 [INFO] There are 265/265 variables loaded into STDCNet.
2023-04-17 14:56:43 [INFO] Use the following config to build train_dataset
train_dataset:dataset_root: data/optic_disc_segmode: trainnum_classes: 2train_path: data/optic_disc_seg/train_list.txttransforms:- max_scale_factor: 2.0min_scale_factor: 0.5scale_step_size: 0.25type: ResizeStepScaling- crop_size:- 512- 512type: RandomPaddingCrop- type: RandomHorizontalFlip- brightness_range: 0.5contrast_range: 0.5saturation_range: 0.5type: RandomDistort- type: Normalizetype: Dataset
2023-04-17 14:56:43 [INFO] Use the following config to build val_dataset
val_dataset:dataset_root: data/optic_disc_segmode: valnum_classes: 2transforms:- type: Normalizetype: Datasetval_path: data/optic_disc_seg/val_list.txt
2023-04-17 14:56:43 [INFO] If the type is SGD and momentum in optimizer config, the type is changed to Momentum.
2023-04-17 14:56:43 [INFO] Use the following config to build optimizer
optimizer:momentum: 0.9type: Momentumweight_decay: 4.0e-05
2023-04-17 14:56:43 [INFO] Use the following config to build loss
loss:coef:- 1- 1- 1types:- type: CrossEntropyLoss- type: CrossEntropyLoss- type: CrossEntropyLoss
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddle/nn/layer/norm.py:654: UserWarning: When training, we now always track global mean and variance."When training, we now always track global mean and variance.")
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddle/fluid/dygraph/math_op_patch.py:278: UserWarning: The dtype of left and right variables are not the same, left dtype is paddle.float32, but right dtype is paddle.int64, the right dtype will convert to paddle.float32format(lhs_dtype, rhs_dtype, lhs_dtype))
2023-04-17 14:56:48 [INFO] [TRAIN] epoch: 1, iter: 10/1000, loss: 1.8301, lr: 0.009919, batch_cost: 0.4808, reader_cost: 0.03611, ips: 8.3188 samples/sec | ETA 00:07:56
2023-04-17 14:56:50 [INFO] [TRAIN] epoch: 1, iter: 20/1000, loss: 0.2660, lr: 0.009829, batch_cost: 0.1780, reader_cost: 0.00073, ips: 22.4715 samples/sec | ETA 00:02:54
2023-04-17 14:56:51 [INFO] [TRAIN] epoch: 1, iter: 30/1000, loss: 0.2680, lr: 0.009739, batch_cost: 0.1734, reader_cost: 0.00098, ips: 23.0648 samples/sec | ETA 00:02:48
2023-04-17 14:56:53 [INFO] [TRAIN] epoch: 1, iter: 40/1000, loss: 0.2693, lr: 0.009648, batch_cost: 0.1822, reader_cost: 0.00063, ips: 21.9513 samples/sec | ETA 00:02:54
2023-04-17 14:56:55 [INFO] [TRAIN] epoch: 1, iter: 50/1000, loss: 0.1483, lr: 0.009558, batch_cost: 0.1768, reader_cost: 0.00023, ips: 22.6197 samples/sec | ETA 00:02:47
2023-04-17 14:56:57 [INFO] [TRAIN] epoch: 1, iter: 60/1000, loss: 0.1708, lr: 0.009467, batch_cost: 0.1828, reader_cost: 0.00021, ips: 21.8799 samples/sec | ETA 00:02:51
2023-04-17 14:56:59 [INFO] [TRAIN] epoch: 2, iter: 70/1000, loss: 0.1212, lr: 0.009377, batch_cost: 0.1943, reader_cost: 0.01919, ips: 20.5824 samples/sec | ETA 00:03:00
2023-04-17 14:57:01 [INFO] [TRAIN] epoch: 2, iter: 80/1000, loss: 0.1512, lr: 0.009286, batch_cost: 0.1931, reader_cost: 0.00068, ips: 20.7097 samples/sec | ETA 00:02:57
2023-04-17 14:57:02 [INFO] [TRAIN] epoch: 2, iter: 90/1000, loss: 0.1165, lr: 0.009195, batch_cost: 0.1717, reader_cost: 0.00019, ips: 23.2938 samples/sec | ETA 00:02:36
2023-04-17 14:57:04 [INFO] [TRAIN] epoch: 2, iter: 100/1000, loss: 0.1300, lr: 0.009104, batch_cost: 0.1697, reader_cost: 0.00144, ips: 23.5693 samples/sec | ETA 00:02:32
2023-04-17 14:57:06 [INFO] [TRAIN] epoch: 2, iter: 110/1000, loss: 0.1105, lr: 0.009013, batch_cost: 0.1767, reader_cost: 0.00058, ips: 22.6331 samples/sec | ETA 00:02:37
2023-04-17 14:57:08 [INFO] [TRAIN] epoch: 2, iter: 120/1000, loss: 0.1203, lr: 0.008922, batch_cost: 0.1817, reader_cost: 0.00023, ips: 22.0152 samples/sec | ETA 00:02:39
2023-04-17 14:57:09 [INFO] [TRAIN] epoch: 2, iter: 130/1000, loss: 0.1280, lr: 0.008831, batch_cost: 0.1835, reader_cost: 0.00023, ips: 21.7939 samples/sec | ETA 00:02:39
2023-04-17 14:57:11 [INFO] [TRAIN] epoch: 3, iter: 140/1000, loss: 0.1398, lr: 0.008740, batch_cost: 0.2004, reader_cost: 0.01695, ips: 19.9617 samples/sec | ETA 00:02:52
2023-04-17 14:57:13 [INFO] [TRAIN] epoch: 3, iter: 150/1000, loss: 0.1050, lr: 0.008648, batch_cost: 0.1860, reader_cost: 0.00064, ips: 21.5105 samples/sec | ETA 00:02:38
2023-04-17 14:57:15 [INFO] [TRAIN] epoch: 3, iter: 160/1000, loss: 0.0917, lr: 0.008557, batch_cost: 0.1840, reader_cost: 0.00071, ips: 21.7387 samples/sec | ETA 00:02:34
2023-04-17 14:57:18 [INFO] [TRAIN] epoch: 3, iter: 170/1000, loss: 0.1131, lr: 0.008465, batch_cost: 0.2818, reader_cost: 0.00062, ips: 14.1947 samples/sec | ETA 00:03:53
2023-04-17 14:57:20 [INFO] [TRAIN] epoch: 3, iter: 180/1000, loss: 0.1282, lr: 0.008374, batch_cost: 0.2457, reader_cost: 0.00059, ips: 16.2797 samples/sec | ETA 00:03:21
2023-04-17 14:57:22 [INFO] [TRAIN] epoch: 3, iter: 190/1000, loss: 0.1054, lr: 0.008282, batch_cost: 0.1832, reader_cost: 0.00064, ips: 21.8293 samples/sec | ETA 00:02:28
2023-04-17 14:57:24 [INFO] [TRAIN] epoch: 4, iter: 200/1000, loss: 0.0883, lr: 0.008190, batch_cost: 0.1841, reader_cost: 0.02428, ips: 21.7325 samples/sec | ETA 00:02:27
2023-04-17 14:57:26 [INFO] [TRAIN] epoch: 4, iter: 210/1000, loss: 0.0647, lr: 0.008098, batch_cost: 0.1914, reader_cost: 0.00065, ips: 20.8941 samples/sec | ETA 00:02:31
2023-04-17 14:57:28 [INFO] [TRAIN] epoch: 4, iter: 220/1000, loss: 0.0734, lr: 0.008005, batch_cost: 0.1835, reader_cost: 0.00061, ips: 21.7982 samples/sec | ETA 00:02:23
2023-04-17 14:57:30 [INFO] [TRAIN] epoch: 4, iter: 230/1000, loss: 0.0686, lr: 0.007913, batch_cost: 0.1729, reader_cost: 0.00021, ips: 23.1404 samples/sec | ETA 00:02:13
2023-04-17 14:57:31 [INFO] [TRAIN] epoch: 4, iter: 240/1000, loss: 0.0662, lr: 0.007821, batch_cost: 0.1804, reader_cost: 0.00020, ips: 22.1685 samples/sec | ETA 00:02:17
2023-04-17 14:57:33 [INFO] [TRAIN] epoch: 4, iter: 250/1000, loss: 0.1325, lr: 0.007728, batch_cost: 0.1673, reader_cost: 0.00058, ips: 23.9108 samples/sec | ETA 00:02:05
2023-04-17 14:57:35 [INFO] [TRAIN] epoch: 4, iter: 260/1000, loss: 0.0677, lr: 0.007635, batch_cost: 0.1800, reader_cost: 0.00068, ips: 22.2174 samples/sec | ETA 00:02:13
2023-04-17 14:57:37 [INFO] [TRAIN] epoch: 5, iter: 270/1000, loss: 0.0670, lr: 0.007543, batch_cost: 0.1860, reader_cost: 0.01406, ips: 21.5053 samples/sec | ETA 00:02:15
2023-04-17 14:57:39 [INFO] [TRAIN] epoch: 5, iter: 280/1000, loss: 0.0927, lr: 0.007450, batch_cost: 0.1840, reader_cost: 0.00066, ips: 21.7432 samples/sec | ETA 00:02:12
2023-04-17 14:57:40 [INFO] [TRAIN] epoch: 5, iter: 290/1000, loss: 0.0711, lr: 0.007357, batch_cost: 0.1876, reader_cost: 0.00022, ips: 21.3194 samples/sec | ETA 00:02:13
2023-04-17 14:57:42 [INFO] [TRAIN] epoch: 5, iter: 300/1000, loss: 0.0610, lr: 0.007264, batch_cost: 0.1869, reader_cost: 0.00022, ips: 21.4039 samples/sec | ETA 00:02:10
2023-04-17 14:57:44 [INFO] [TRAIN] epoch: 5, iter: 310/1000, loss: 0.0587, lr: 0.007170, batch_cost: 0.1913, reader_cost: 0.00023, ips: 20.9050 samples/sec | ETA 00:02:12
2023-04-17 14:57:46 [INFO] [TRAIN] epoch: 5, iter: 320/1000, loss: 0.0801, lr: 0.007077, batch_cost: 0.1865, reader_cost: 0.00062, ips: 21.4471 samples/sec | ETA 00:02:06
2023-04-17 14:57:48 [INFO] [TRAIN] epoch: 5, iter: 330/1000, loss: 0.0554, lr: 0.006983, batch_cost: 0.1526, reader_cost: 0.00017, ips: 26.2159 samples/sec | ETA 00:01:42
2023-04-17 14:57:50 [INFO] [TRAIN] epoch: 6, iter: 340/1000, loss: 0.0572, lr: 0.006889, batch_cost: 0.2533, reader_cost: 0.01760, ips: 15.7913 samples/sec | ETA 00:02:47
2023-04-17 14:57:53 [INFO] [TRAIN] epoch: 6, iter: 350/1000, loss: 0.0654, lr: 0.006796, batch_cost: 0.2372, reader_cost: 0.00030, ips: 16.8659 samples/sec | ETA 00:02:34
2023-04-17 14:57:54 [INFO] [TRAIN] epoch: 6, iter: 360/1000, loss: 0.0588, lr: 0.006702, batch_cost: 0.1882, reader_cost: 0.00100, ips: 21.2507 samples/sec | ETA 00:02:00
2023-04-17 14:57:57 [INFO] [TRAIN] epoch: 6, iter: 370/1000, loss: 0.0576, lr: 0.006607, batch_cost: 0.2174, reader_cost: 0.00058, ips: 18.4014 samples/sec | ETA 00:02:16
2023-04-17 14:57:58 [INFO] [TRAIN] epoch: 6, iter: 380/1000, loss: 0.0681, lr: 0.006513, batch_cost: 0.1749, reader_cost: 0.00022, ips: 22.8648 samples/sec | ETA 00:01:48
2023-04-17 14:58:00 [INFO] [TRAIN] epoch: 6, iter: 390/1000, loss: 0.0690, lr: 0.006419, batch_cost: 0.1690, reader_cost: 0.00020, ips: 23.6622 samples/sec | ETA 00:01:43
2023-04-17 14:58:02 [INFO] [TRAIN] epoch: 7, iter: 400/1000, loss: 0.0447, lr: 0.006324, batch_cost: 0.1825, reader_cost: 0.01652, ips: 21.9185 samples/sec | ETA 00:01:49
2023-04-17 14:58:04 [INFO] [TRAIN] epoch: 7, iter: 410/1000, loss: 0.0637, lr: 0.006229, batch_cost: 0.1819, reader_cost: 0.00098, ips: 21.9948 samples/sec | ETA 00:01:47
2023-04-17 14:58:06 [INFO] [TRAIN] epoch: 7, iter: 420/1000, loss: 0.0641, lr: 0.006134, batch_cost: 0.1838, reader_cost: 0.00022, ips: 21.7608 samples/sec | ETA 00:01:46
2023-04-17 14:58:07 [INFO] [TRAIN] epoch: 7, iter: 430/1000, loss: 0.0386, lr: 0.006039, batch_cost: 0.1774, reader_cost: 0.00058, ips: 22.5486 samples/sec | ETA 00:01:41
2023-04-17 14:58:09 [INFO] [TRAIN] epoch: 7, iter: 440/1000, loss: 0.0364, lr: 0.005944, batch_cost: 0.1804, reader_cost: 0.00057, ips: 22.1788 samples/sec | ETA 00:01:40
2023-04-17 14:58:11 [INFO] [TRAIN] epoch: 7, iter: 450/1000, loss: 0.0417, lr: 0.005848, batch_cost: 0.1662, reader_cost: 0.00021, ips: 24.0732 samples/sec | ETA 00:01:31
2023-04-17 14:58:13 [INFO] [TRAIN] epoch: 7, iter: 460/1000, loss: 0.0509, lr: 0.005753, batch_cost: 0.1720, reader_cost: 0.00058, ips: 23.2565 samples/sec | ETA 00:01:32
2023-04-17 14:58:15 [INFO] [TRAIN] epoch: 8, iter: 470/1000, loss: 0.1320, lr: 0.005657, batch_cost: 0.2386, reader_cost: 0.01169, ips: 16.7617 samples/sec | ETA 00:02:06
2023-04-17 14:58:17 [INFO] [TRAIN] epoch: 8, iter: 480/1000, loss: 0.0689, lr: 0.005561, batch_cost: 0.1869, reader_cost: 0.00057, ips: 21.3961 samples/sec | ETA 00:01:37
2023-04-17 14:58:19 [INFO] [TRAIN] epoch: 8, iter: 490/1000, loss: 0.0776, lr: 0.005465, batch_cost: 0.1964, reader_cost: 0.00061, ips: 20.3634 samples/sec | ETA 00:01:40
2023-04-17 14:58:21 [INFO] [TRAIN] epoch: 8, iter: 500/1000, loss: 0.0579, lr: 0.005369, batch_cost: 0.2013, reader_cost: 0.00100, ips: 19.8714 samples/sec | ETA 00:01:40
2023-04-17 14:58:21 [INFO] Start evaluating (total_samples: 76, total_iters: 76)...
76/76 [==============================] - 6s 81ms/step - batch_cost: 0.0807 - reader cost: 5.0916e-04
2023-04-17 14:58:27 [INFO] [EVAL] #Images: 76 mIoU: 0.8665 Acc: 0.9941 Kappa: 0.8469 Dice: 0.9234
2023-04-17 14:58:27 [INFO] [EVAL] Class IoU:
[0.994 0.739]
2023-04-17 14:58:27 [INFO] [EVAL] Class Precision:
[0.9984 0.7934]
2023-04-17 14:58:27 [INFO] [EVAL] Class Recall:
[0.9955 0.9151]
2023-04-17 14:58:27 [INFO] [EVAL] The model with the best validation mIoU (0.8665) was saved at iter 500.
2023-04-17 14:58:29 [INFO] [TRAIN] epoch: 8, iter: 510/1000, loss: 0.0530, lr: 0.005272, batch_cost: 0.1799, reader_cost: 0.00019, ips: 22.2354 samples/sec | ETA 00:01:28
2023-04-17 14:58:31 [INFO] [TRAIN] epoch: 8, iter: 520/1000, loss: 0.0402, lr: 0.005175, batch_cost: 0.1932, reader_cost: 0.00022, ips: 20.7009 samples/sec | ETA 00:01:32
2023-04-17 14:58:33 [INFO] [TRAIN] epoch: 9, iter: 530/1000, loss: 0.0484, lr: 0.005078, batch_cost: 0.1912, reader_cost: 0.01616, ips: 20.9249 samples/sec | ETA 00:01:29
2023-04-17 14:58:35 [INFO] [TRAIN] epoch: 9, iter: 540/1000, loss: 0.0584, lr: 0.004981, batch_cost: 0.2206, reader_cost: 0.00033, ips: 18.1338 samples/sec | ETA 00:01:41
2023-04-17 14:58:37 [INFO] [TRAIN] epoch: 9, iter: 550/1000, loss: 0.0464, lr: 0.004884, batch_cost: 0.1991, reader_cost: 0.00212, ips: 20.0863 samples/sec | ETA 00:01:29
2023-04-17 14:58:39 [INFO] [TRAIN] epoch: 9, iter: 560/1000, loss: 0.0485, lr: 0.004786, batch_cost: 0.1757, reader_cost: 0.00059, ips: 22.7657 samples/sec | ETA 00:01:17
2023-04-17 14:58:41 [INFO] [TRAIN] epoch: 9, iter: 570/1000, loss: 0.0426, lr: 0.004688, batch_cost: 0.1695, reader_cost: 0.00027, ips: 23.6019 samples/sec | ETA 00:01:12
2023-04-17 14:58:43 [INFO] [TRAIN] epoch: 9, iter: 580/1000, loss: 0.0464, lr: 0.004590, batch_cost: 0.1734, reader_cost: 0.00069, ips: 23.0633 samples/sec | ETA 00:01:12
2023-04-17 14:58:44 [INFO] [TRAIN] epoch: 9, iter: 590/1000, loss: 0.0572, lr: 0.004492, batch_cost: 0.1652, reader_cost: 0.00018, ips: 24.2180 samples/sec | ETA 00:01:07
2023-04-17 14:58:46 [INFO] [TRAIN] epoch: 10, iter: 600/1000, loss: 0.0604, lr: 0.004394, batch_cost: 0.1745, reader_cost: 0.01671, ips: 22.9191 samples/sec | ETA 00:01:09
2023-04-17 14:58:48 [INFO] [TRAIN] epoch: 10, iter: 610/1000, loss: 0.0651, lr: 0.004295, batch_cost: 0.1915, reader_cost: 0.00064, ips: 20.8873 samples/sec | ETA 00:01:14
2023-04-17 14:58:50 [INFO] [TRAIN] epoch: 10, iter: 620/1000, loss: 0.0352, lr: 0.004196, batch_cost: 0.1742, reader_cost: 0.00028, ips: 22.9583 samples/sec | ETA 00:01:06
2023-04-17 14:58:51 [INFO] [TRAIN] epoch: 10, iter: 630/1000, loss: 0.0476, lr: 0.004097, batch_cost: 0.1833, reader_cost: 0.00021, ips: 21.8257 samples/sec | ETA 00:01:07
2023-04-17 14:58:53 [INFO] [TRAIN] epoch: 10, iter: 640/1000, loss: 0.0660, lr: 0.003997, batch_cost: 0.1657, reader_cost: 0.00059, ips: 24.1443 samples/sec | ETA 00:00:59
2023-04-17 14:58:55 [INFO] [TRAIN] epoch: 10, iter: 650/1000, loss: 0.0395, lr: 0.003897, batch_cost: 0.1787, reader_cost: 0.00023, ips: 22.3844 samples/sec | ETA 00:01:02
2023-04-17 14:58:57 [INFO] [TRAIN] epoch: 10, iter: 660/1000, loss: 0.0412, lr: 0.003797, batch_cost: 0.1852, reader_cost: 0.00028, ips: 21.5993 samples/sec | ETA 00:01:02
2023-04-17 14:58:59 [INFO] [TRAIN] epoch: 11, iter: 670/1000, loss: 0.0408, lr: 0.003697, batch_cost: 0.2372, reader_cost: 0.01716, ips: 16.8609 samples/sec | ETA 00:01:18
2023-04-17 14:59:01 [INFO] [TRAIN] epoch: 11, iter: 680/1000, loss: 0.0663, lr: 0.003596, batch_cost: 0.1888, reader_cost: 0.00058, ips: 21.1918 samples/sec | ETA 00:01:00
2023-04-17 14:59:03 [INFO] [TRAIN] epoch: 11, iter: 690/1000, loss: 0.0696, lr: 0.003495, batch_cost: 0.1720, reader_cost: 0.00018, ips: 23.2603 samples/sec | ETA 00:00:53
2023-04-17 14:59:04 [INFO] [TRAIN] epoch: 11, iter: 700/1000, loss: 0.0370, lr: 0.003394, batch_cost: 0.1687, reader_cost: 0.00162, ips: 23.7098 samples/sec | ETA 00:00:50
2023-04-17 14:59:06 [INFO] [TRAIN] epoch: 11, iter: 710/1000, loss: 0.0450, lr: 0.003292, batch_cost: 0.1696, reader_cost: 0.00064, ips: 23.5806 samples/sec | ETA 00:00:49
2023-04-17 14:59:08 [INFO] [TRAIN] epoch: 11, iter: 720/1000, loss: 0.0318, lr: 0.003190, batch_cost: 0.1707, reader_cost: 0.00019, ips: 23.4329 samples/sec | ETA 00:00:47
2023-04-17 14:59:09 [INFO] [TRAIN] epoch: 12, iter: 730/1000, loss: 0.0379, lr: 0.003088, batch_cost: 0.1694, reader_cost: 0.01184, ips: 23.6103 samples/sec | ETA 00:00:45
2023-04-17 14:59:11 [INFO] [TRAIN] epoch: 12, iter: 740/1000, loss: 0.0759, lr: 0.002985, batch_cost: 0.1812, reader_cost: 0.00022, ips: 22.0776 samples/sec | ETA 00:00:47
2023-04-17 14:59:13 [INFO] [TRAIN] epoch: 12, iter: 750/1000, loss: 0.0355, lr: 0.002882, batch_cost: 0.1740, reader_cost: 0.00070, ips: 22.9950 samples/sec | ETA 00:00:43
2023-04-17 14:59:15 [INFO] [TRAIN] epoch: 12, iter: 760/1000, loss: 0.0381, lr: 0.002779, batch_cost: 0.1862, reader_cost: 0.00032, ips: 21.4840 samples/sec | ETA 00:00:44
2023-04-17 14:59:17 [INFO] [TRAIN] epoch: 12, iter: 770/1000, loss: 0.0373, lr: 0.002675, batch_cost: 0.1839, reader_cost: 0.00023, ips: 21.7454 samples/sec | ETA 00:00:42
2023-04-17 14:59:19 [INFO] [TRAIN] epoch: 12, iter: 780/1000, loss: 0.0308, lr: 0.002570, batch_cost: 0.1879, reader_cost: 0.00068, ips: 21.2879 samples/sec | ETA 00:00:41
2023-04-17 14:59:21 [INFO] [TRAIN] epoch: 12, iter: 790/1000, loss: 0.0388, lr: 0.002465, batch_cost: 0.1929, reader_cost: 0.00027, ips: 20.7397 samples/sec | ETA 00:00:40
2023-04-17 14:59:22 [INFO] [TRAIN] epoch: 13, iter: 800/1000, loss: 0.0439, lr: 0.002360, batch_cost: 0.1930, reader_cost: 0.01305, ips: 20.7244 samples/sec | ETA 00:00:38
2023-04-17 14:59:24 [INFO] [TRAIN] epoch: 13, iter: 810/1000, loss: 0.0465, lr: 0.002254, batch_cost: 0.1903, reader_cost: 0.00026, ips: 21.0155 samples/sec | ETA 00:00:36
2023-04-17 14:59:26 [INFO] [TRAIN] epoch: 13, iter: 820/1000, loss: 0.0380, lr: 0.002147, batch_cost: 0.1793, reader_cost: 0.00063, ips: 22.3071 samples/sec | ETA 00:00:32
2023-04-17 14:59:28 [INFO] [TRAIN] epoch: 13, iter: 830/1000, loss: 0.0407, lr: 0.002040, batch_cost: 0.1803, reader_cost: 0.00022, ips: 22.1903 samples/sec | ETA 00:00:30
2023-04-17 14:59:31 [INFO] [TRAIN] epoch: 13, iter: 840/1000, loss: 0.0317, lr: 0.001933, batch_cost: 0.2541, reader_cost: 0.00104, ips: 15.7399 samples/sec | ETA 00:00:40
2023-04-17 14:59:33 [INFO] [TRAIN] epoch: 13, iter: 850/1000, loss: 0.0354, lr: 0.001824, batch_cost: 0.2087, reader_cost: 0.00131, ips: 19.1656 samples/sec | ETA 00:00:31
2023-04-17 14:59:34 [INFO] [TRAIN] epoch: 14, iter: 860/1000, loss: 0.0435, lr: 0.001715, batch_cost: 0.1788, reader_cost: 0.01202, ips: 22.3755 samples/sec | ETA 00:00:25
2023-04-17 14:59:36 [INFO] [TRAIN] epoch: 14, iter: 870/1000, loss: 0.0404, lr: 0.001605, batch_cost: 0.1811, reader_cost: 0.00022, ips: 22.0910 samples/sec | ETA 00:00:23
2023-04-17 14:59:38 [INFO] [TRAIN] epoch: 14, iter: 880/1000, loss: 0.0360, lr: 0.001495, batch_cost: 0.1977, reader_cost: 0.00034, ips: 20.2353 samples/sec | ETA 00:00:23
2023-04-17 14:59:40 [INFO] [TRAIN] epoch: 14, iter: 890/1000, loss: 0.0441, lr: 0.001383, batch_cost: 0.1781, reader_cost: 0.00096, ips: 22.4619 samples/sec | ETA 00:00:19
2023-04-17 14:59:42 [INFO] [TRAIN] epoch: 14, iter: 900/1000, loss: 0.0412, lr: 0.001270, batch_cost: 0.1710, reader_cost: 0.00063, ips: 23.3910 samples/sec | ETA 00:00:17
2023-04-17 14:59:43 [INFO] [TRAIN] epoch: 14, iter: 910/1000, loss: 0.0386, lr: 0.001156, batch_cost: 0.1718, reader_cost: 0.00061, ips: 23.2784 samples/sec | ETA 00:00:15
2023-04-17 14:59:45 [INFO] [TRAIN] epoch: 14, iter: 920/1000, loss: 0.0393, lr: 0.001041, batch_cost: 0.1797, reader_cost: 0.00059, ips: 22.2636 samples/sec | ETA 00:00:14
2023-04-17 14:59:47 [INFO] [TRAIN] epoch: 15, iter: 930/1000, loss: 0.0457, lr: 0.000925, batch_cost: 0.1801, reader_cost: 0.01616, ips: 22.2147 samples/sec | ETA 00:00:12
2023-04-17 14:59:49 [INFO] [TRAIN] epoch: 15, iter: 940/1000, loss: 0.0331, lr: 0.000807, batch_cost: 0.1965, reader_cost: 0.00023, ips: 20.3553 samples/sec | ETA 00:00:11
2023-04-17 14:59:51 [INFO] [TRAIN] epoch: 15, iter: 950/1000, loss: 0.0337, lr: 0.000687, batch_cost: 0.1823, reader_cost: 0.00103, ips: 21.9386 samples/sec | ETA 00:00:09
2023-04-17 14:59:52 [INFO] [TRAIN] epoch: 15, iter: 960/1000, loss: 0.0640, lr: 0.000564, batch_cost: 0.1629, reader_cost: 0.00017, ips: 24.5522 samples/sec | ETA 00:00:06
2023-04-17 14:59:54 [INFO] [TRAIN] epoch: 15, iter: 970/1000, loss: 0.0342, lr: 0.000439, batch_cost: 0.1649, reader_cost: 0.00017, ips: 24.2634 samples/sec | ETA 00:00:04
2023-04-17 14:59:56 [INFO] [TRAIN] epoch: 15, iter: 980/1000, loss: 0.0349, lr: 0.000309, batch_cost: 0.1623, reader_cost: 0.00017, ips: 24.6481 samples/sec | ETA 00:00:03
2023-04-17 14:59:58 [INFO] [TRAIN] epoch: 15, iter: 990/1000, loss: 0.0443, lr: 0.000173, batch_cost: 0.1848, reader_cost: 0.00025, ips: 21.6424 samples/sec | ETA 00:00:01
2023-04-17 15:00:00 [INFO] [TRAIN] epoch: 16, iter: 1000/1000, loss: 0.0323, lr: 0.000020, batch_cost: 0.1999, reader_cost: 0.01375, ips: 20.0084 samples/sec | ETA 00:00:00
2023-04-17 15:00:00 [INFO] Start evaluating (total_samples: 76, total_iters: 76)...
76/76 [==============================] - 5s 66ms/step - batch_cost: 0.0661 - reader cost: 3.5980e-04
2023-04-17 15:00:05 [INFO] [EVAL] #Images: 76 mIoU: 0.9137 Acc: 0.9967 Kappa: 0.9059 Dice: 0.9530
2023-04-17 15:00:05 [INFO] [EVAL] Class IoU:
[0.9966 0.8309]
2023-04-17 15:00:05 [INFO] [EVAL] Class Precision:
[0.998 0.9246]
2023-04-17 15:00:05 [INFO] [EVAL] Class Recall:
[0.9986 0.8913]
2023-04-17 15:00:06 [INFO] [EVAL] The model with the best validation mIoU (0.9137) was saved at iter 1000.
<class 'paddle.nn.layer.conv.Conv2D'>'s flops has been counted
<class 'paddle.nn.layer.norm.BatchNorm2D'>'s flops has been counted
<class 'paddle.nn.layer.activation.ReLU'>'s flops has been counted
<class 'paddle.nn.layer.pooling.AvgPool2D'>'s flops has been counted
<class 'paddle.nn.layer.pooling.AdaptiveAvgPool2D'>'s flops has been counted
Total Flops: 9643807616 Total Params: 12251410
模型导出:静态模型权重文件,后续标注时需要此模型。
!python tools/export.py --config configs/quick_start/pp_liteseg_optic_disc_512x512_1k.yml --model_path output/best_model/model.pdparams --save_dir output/infer_model
2023-04-17 15:01:21 [WARNING] Add the `num_classes` in train_dataset and val_dataset config to model config. We suggest you manually set `num_classes` in model config.
2023-04-17 15:01:21 [INFO]
------------Environment Information-------------
platform: Linux-4.15.0-140-generic-x86_64-with-debian-stretch-sid
Python: 3.7.4 (default, Aug 13 2019, 20:35:49) [GCC 7.3.0]
Paddle compiled with cuda: True
NVCC: Build cuda_11.2.r11.2/compiler.29618528_0
cudnn: 8.2
GPUs used: 1
CUDA_VISIBLE_DEVICES: None
GPU: ['GPU 0: Tesla V100-SXM2-16GB']
GCC: gcc (Ubuntu 7.5.0-3ubuntu1~16.04) 7.5.0
PaddleSeg: 2.8.0
PaddlePaddle: 2.3.2
OpenCV: 4.5.5
------------------------------------------------
2023-04-17 15:01:21 [INFO]
---------------Config Information---------------
batch_size: 4
iters: 1000
train_dataset:dataset_root: data/optic_disc_segmode: trainnum_classes: 2train_path: data/optic_disc_seg/train_list.txttransforms:- max_scale_factor: 2.0min_scale_factor: 0.5scale_step_size: 0.25type: ResizeStepScaling- crop_size:- 512- 512type: RandomPaddingCrop- type: RandomHorizontalFlip- brightness_range: 0.5contrast_range: 0.5saturation_range: 0.5type: RandomDistort- type: Normalizetype: Dataset
val_dataset:dataset_root: data/optic_disc_segmode: valnum_classes: 2transforms:- type: Normalizetype: Datasetval_path: data/optic_disc_seg/val_list.txt
optimizer:momentum: 0.9type: SGDweight_decay: 4.0e-05
lr_scheduler:end_lr: 0learning_rate: 0.01power: 0.9type: PolynomialDecay
loss:coef:- 1- 1- 1types:- type: CrossEntropyLoss- type: CrossEntropyLoss- type: CrossEntropyLoss
model:backbone:pretrained: https://bj.bcebos.com/paddleseg/dygraph/PP_STDCNet2.tar.gztype: STDC2num_classes: 2type: PPLiteSeg
------------------------------------------------2023-04-17 15:01:21 [INFO] Use the following config to build model
model:backbone:pretrained: https://bj.bcebos.com/paddleseg/dygraph/PP_STDCNet2.tar.gztype: STDC2num_classes: 2type: PPLiteSeg
W0417 15:01:21.536304 1474 gpu_resources.cc:61] Please NOTE: device: 0, GPU Compute Capability: 7.0, Driver API Version: 11.2, Runtime API Version: 11.2
W0417 15:01:21.536358 1474 gpu_resources.cc:91] device: 0, cuDNN Version: 8.2.
2023-04-17 15:01:23 [INFO] Loading pretrained model from https://bj.bcebos.com/paddleseg/dygraph/PP_STDCNet2.tar.gz
2023-04-17 15:01:23 [INFO] There are 265/265 variables loaded into STDCNet.
2023-04-17 15:01:23 [INFO] Loaded trained params successfully.
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddle/fluid/layers/math_op_patch.py:341: UserWarning: /tmp/tmpg6xgkiu2.py:26
The behavior of expression A + B has been unified with elementwise_add(X, Y, axis=-1) from Paddle 2.0. If your code works well in the older versions but crashes in this version, try to use elementwise_add(X, Y, axis=0) instead of A + B. This transitional warning will be dropped in the future.op_type, op_type, EXPRESSION_MAP[method_name]))
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddle/fluid/layers/math_op_patch.py:341: UserWarning: /tmp/tmpkt8092ea.py:16
The behavior of expression A * B has been unified with elementwise_mul(X, Y, axis=-1) from Paddle 2.0. If your code works well in the older versions but crashes in this version, try to use elementwise_mul(X, Y, axis=0) instead of A * B. This transitional warning will be dropped in the future.op_type, op_type, EXPRESSION_MAP[method_name]))
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddle/fluid/layers/math_op_patch.py:341: UserWarning: /tmp/tmpkt8092ea.py:16
The behavior of expression A - B has been unified with elementwise_sub(X, Y, axis=-1) from Paddle 2.0. If your code works well in the older versions but crashes in this version, try to use elementwise_sub(X, Y, axis=0) instead of A - B. This transitional warning will be dropped in the future.op_type, op_type, EXPRESSION_MAP[method_name]))
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddle/fluid/layers/math_op_patch.py:341: UserWarning: /tmp/tmpkt8092ea.py:16
The behavior of expression A + B has been unified with elementwise_add(X, Y, axis=-1) from Paddle 2.0. If your code works well in the older versions but crashes in this version, try to use elementwise_add(X, Y, axis=0) instead of A + B. This transitional warning will be dropped in the future.op_type, op_type, EXPRESSION_MAP[method_name]))
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddle/fluid/layers/math_op_patch.py:341: UserWarning: /tmp/tmpsv63pivm.py:16
The behavior of expression A * B has been unified with elementwise_mul(X, Y, axis=-1) from Paddle 2.0. If your code works well in the older versions but crashes in this version, try to use elementwise_mul(X, Y, axis=0) instead of A * B. This transitional warning will be dropped in the future.op_type, op_type, EXPRESSION_MAP[method_name]))
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddle/fluid/layers/math_op_patch.py:341: UserWarning: /tmp/tmpsv63pivm.py:16
The behavior of expression A - B has been unified with elementwise_sub(X, Y, axis=-1) from Paddle 2.0. If your code works well in the older versions but crashes in this version, try to use elementwise_sub(X, Y, axis=0) instead of A - B. This transitional warning will be dropped in the future.op_type, op_type, EXPRESSION_MAP[method_name]))
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddle/fluid/layers/math_op_patch.py:341: UserWarning: /tmp/tmpsv63pivm.py:16
The behavior of expression A + B has been unified with elementwise_add(X, Y, axis=-1) from Paddle 2.0. If your code works well in the older versions but crashes in this version, try to use elementwise_add(X, Y, axis=0) instead of A + B. This transitional warning will be dropped in the future.op_type, op_type, EXPRESSION_MAP[method_name]))
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddle/fluid/layers/math_op_patch.py:341: UserWarning: /tmp/tmpfxnr24w9.py:16
The behavior of expression A * B has been unified with elementwise_mul(X, Y, axis=-1) from Paddle 2.0. If your code works well in the older versions but crashes in this version, try to use elementwise_mul(X, Y, axis=0) instead of A * B. This transitional warning will be dropped in the future.op_type, op_type, EXPRESSION_MAP[method_name]))
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddle/fluid/layers/math_op_patch.py:341: UserWarning: /tmp/tmpfxnr24w9.py:16
The behavior of expression A - B has been unified with elementwise_sub(X, Y, axis=-1) from Paddle 2.0. If your code works well in the older versions but crashes in this version, try to use elementwise_sub(X, Y, axis=0) instead of A - B. This transitional warning will be dropped in the future.op_type, op_type, EXPRESSION_MAP[method_name]))
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddle/fluid/layers/math_op_patch.py:341: UserWarning: /tmp/tmpfxnr24w9.py:16
The behavior of expression A + B has been unified with elementwise_add(X, Y, axis=-1) from Paddle 2.0. If your code works well in the older versions but crashes in this version, try to use elementwise_add(X, Y, axis=0) instead of A + B. This transitional warning will be dropped in the future.op_type, op_type, EXPRESSION_MAP[method_name]))
2023-04-17 15:01:28 [INFO]
---------------Deploy Information---------------
Deploy:input_shape:- -1- 3- -1- -1model: model.pdmodeloutput_dtype: int32output_op: argmaxparams: model.pdiparamstransforms:- type: Normalize2023-04-17 15:01:28 [INFO] The inference model is saved in output/infer_model
六、生成annotations
编写代码,对一批新数据进行推理,输出mask和对应标签文件annotations.json
修改后的predict.py代码在github中:https://github.com/chunyuwei/PaddleSeg的release/2.8分支中。
下载即用,不用再次修改;代码如下所示:
# Copyright (c) 2020 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.import os
import math
import jsonimport cv2
import numpy as np
import paddlefrom paddleseg import utils
from paddleseg.core import infer
from eiseg.util.polygon import get_polygon
from paddleseg.utils import logger, progbar, visualizedef mkdir(path):sub_dir = os.path.dirname(path)if not os.path.exists(sub_dir):os.makedirs(sub_dir)def partition_list(arr, m):"""split the list 'arr' into m pieces"""n = int(math.ceil(len(arr) / float(m)))return [arr[i:i + n] for i in range(0, len(arr), n)]def preprocess(im_path, transforms):data = {}data['img'] = im_pathdata = transforms(data)data['img'] = data['img'][np.newaxis, ...]data['img'] = paddle.to_tensor(data['img'])return data# convert various types of data into JSON format
class NpEncoder(json.JSONEncoder):def default(self, obj):if isinstance(obj, np.integer):return int(obj)elif isinstance(obj, np.floating):return float(obj)elif isinstance(obj, np.ndarray):return obj.tolist()elif isinstance(obj, datetime.datetime):return obj.strftime('%Y-%m-%dT%H:%M:%S')else:return super(NpEncoder, self).default(obj)def predict(model,model_path,transforms,image_list,image_dir=None,save_dir='output',aug_pred=False,scales=1.0,flip_horizontal=True,flip_vertical=False,is_slide=False,stride=None,crop_size=None,custom_color=None):"""predict and visualize the image_list.Args:model (nn.Layer): Used to predict for input image.model_path (str): The path of pretrained model.transforms (transform.Compose): Preprocess for input image.image_list (list): A list of image path to be predicted.image_dir (str, optional): The root directory of the images predicted. Default: None.save_dir (str, optional): The directory to save the visualized results. Default: 'output'.aug_pred (bool, optional): Whether to use mulit-scales and flip augment for predition. Default: False.scales (list|float, optional): Scales for augment. It is valid when `aug_pred` is True. Default: 1.0.flip_horizontal (bool, optional): Whether to use flip horizontally augment. It is valid when `aug_pred` is True. Default: True.flip_vertical (bool, optional): Whether to use flip vertically augment. It is valid when `aug_pred` is True. Default: False.is_slide (bool, optional): Whether to predict by sliding window. Default: False.stride (tuple|list, optional): The stride of sliding window, the first is width and the second is height.It should be provided when `is_slide` is True.crop_size (tuple|list, optional): The crop size of sliding window, the first is width and the second is height.It should be provided when `is_slide` is True.custom_color (list, optional): Save images with a custom color map. Default: None, use paddleseg's default color map."""utils.utils.load_entire_model(model, model_path)model.eval()nranks = paddle.distributed.get_world_size()local_rank = paddle.distributed.get_rank()if nranks > 1:img_lists = partition_list(image_list, nranks)else:img_lists = [image_list]added_saved_dir = os.path.join(save_dir, 'added_prediction')pred_saved_dir = os.path.join(save_dir, 'pseudo_color_prediction')json_saved_name = os.path.join(save_dir, 'annotations.json')polygons = []logger.info("Start to predict...")progbar_pred = progbar.Progbar(target=len(img_lists[0]), verbose=1)color_map = visualize.get_color_map_list(256, custom_color=custom_color)with paddle.no_grad():# define the nodes required for JSON, including images, colors, etcimages = []annotations = []categories = []bk_color = {"id": 1,"name": "bk","color": [0, 0, 0],"supercategory": "",}categories.append(bk_color)obj_color = {"id": 2,"name": "obj","color": [128, 0, 0],"supercategory": "",}categories.append(obj_color)for i, im_path in enumerate(img_lists[local_rank]):data = preprocess(im_path, transforms)if aug_pred:pred, _ = infer.aug_inference(model,data['img'],trans_info=data['trans_info'],scales=scales,flip_horizontal=flip_horizontal,flip_vertical=flip_vertical,is_slide=is_slide,stride=stride,crop_size=crop_size)else:pred, _ = infer.inference(model,data['img'],trans_info=data['trans_info'],is_slide=is_slide,stride=stride,crop_size=crop_size)pred = paddle.squeeze(pred)pred = pred.numpy().astype('uint8')# obtain polygon verticespolygons = get_polygon((pred * 255), img_size=pred.shape, building=False)# get the saved nameif image_dir is not None:im_file = im_path.replace(image_dir, '')else:im_file = os.path.basename(im_path)if im_file[0] == '/' or im_file[0] == '\\':im_file = im_file[1:]# save added imageadded_image = utils.visualize.visualize(im_path, pred, color_map, weight=0.6)added_image_path = os.path.join(added_saved_dir, im_file)mkdir(added_image_path)cv2.imwrite(added_image_path, added_image)# save pseudo color predictionpred_mask = utils.visualize.get_pseudo_color_map(pred, color_map)pred_saved_path = os.path.join(pred_saved_dir, os.path.splitext(im_file)[0] + ".png")mkdir(pred_saved_path)pred_mask.save(pred_saved_path)progbar_pred.update(i + 1)# define the information required for a single imageimage = {"id": i + 1,"width": pred.shape[1],"height": pred.shape[0],"file_name": im_file,"license": "","flickr_url": "","coco_url": "","date_captured": ""}images.append(image)# store polygon vertices in annotationannotation = {"id": i + 1,"iscrowd": 0,"image_id": i + 1,"category_id": 2,"segmentation": [],"area": 0,"bbox": [],}for polygon in polygons:tmp = []for p in polygon:tmp.append(p[0])tmp.append(p[1])annotation["segmentation"].append(tmp)annotations.append(annotation)# summarize all information together to form annotated datajson_data = {"categories": [],"images": [],"annotations": [],"info": "","licenses": [],}json_data["categories"] = categoriesjson_data["images"] = imagesjson_data["annotations"] = annotations# save JSON fileopen(json_saved_name, "w",encoding="utf-8").write(json.dumps(json_data, cls=NpEncoder))logger.info("Predicted images are saved in {} and {} .".format(added_saved_dir, pred_saved_dir))
从眼底数据集中找出几张图,放入data/optic_disc_seg_test中,来模拟这个过程:
使用下面的命令,对这批图像进行预测,产生新的标签包括annotations.json。
!python tools/predict.py --config configs/quick_start/pp_liteseg_optic_disc_512x512_1k.yml --model_path output/best_model/model.pdparams --image_path data/optic_disc_seg_test --save_dir output/result
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddleseg-2.8.0-py3.7.egg/paddleseg/models/layers/ms_deformable_attention.py:107: DeprecationWarning: invalid escape sequence \s
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddleseg-2.8.0-py3.7.egg/paddleseg/models/layers/ms_deformable_attention.py:107: DeprecationWarning: invalid escape sequence \s
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddleseg-2.8.0-py3.7.egg/paddleseg/models/losses/rmi_loss.py:78: DeprecationWarning: invalid escape sequence \i
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/paddleseg-2.8.0-py3.7.egg/paddleseg/models/losses/rmi_loss.py:78: DeprecationWarning: invalid escape sequence \i
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/matplotlib/__init__.py:107: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop workingfrom collections import MutableMapping
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/matplotlib/rcsetup.py:20: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop workingfrom collections import Iterable, Mapping
/opt/conda/envs/python35-paddle120-env/lib/python3.7/site-packages/matplotlib/colors.py:53: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop workingfrom collections import Sized
2023-04-17 15:45:15 [WARNING] Add the `num_classes` in train_dataset and val_dataset config to model config. We suggest you manually set `num_classes` in model config.
2023-04-17 15:45:15 [INFO]
------------Environment Information-------------
platform: Linux-4.15.0-158-generic-x86_64-with-debian-stretch-sid
Python: 3.7.4 (default, Aug 13 2019, 20:35:49) [GCC 7.3.0]
Paddle compiled with cuda: True
NVCC: Build cuda_11.2.r11.2/compiler.29618528_0
cudnn: 8.2
GPUs used: 1
CUDA_VISIBLE_DEVICES: None
GPU: ['GPU 0: A100-SXM4-40GB (UUID:']
GCC: gcc (Ubuntu 7.5.0-3ubuntu1~16.04) 7.5.0
PaddleSeg: 2.8.0
PaddlePaddle: 2.3.2
OpenCV: 4.5.5
------------------------------------------------
2023-04-17 15:45:15 [INFO]
---------------Config Information---------------
batch_size: 4
iters: 1000
train_dataset:dataset_root: data/optic_disc_segmode: trainnum_classes: 2train_path: data/optic_disc_seg/train_list.txttransforms:- max_scale_factor: 2.0min_scale_factor: 0.5scale_step_size: 0.25type: ResizeStepScaling- crop_size:- 512- 512type: RandomPaddingCrop- type: RandomHorizontalFlip- brightness_range: 0.5contrast_range: 0.5saturation_range: 0.5type: RandomDistort- type: Normalizetype: Dataset
val_dataset:dataset_root: data/optic_disc_segmode: valnum_classes: 2transforms:- type: Normalizetype: Datasetval_path: data/optic_disc_seg/val_list.txt
optimizer:momentum: 0.9type: SGDweight_decay: 4.0e-05
lr_scheduler:end_lr: 0learning_rate: 0.01power: 0.9type: PolynomialDecay
loss:coef:- 1- 1- 1types:- type: CrossEntropyLoss- type: CrossEntropyLoss- type: CrossEntropyLoss
model:backbone:pretrained: https://bj.bcebos.com/paddleseg/dygraph/PP_STDCNet2.tar.gztype: STDC2num_classes: 2type: PPLiteSeg
------------------------------------------------2023-04-17 15:45:15 [INFO] Set device: gpu
2023-04-17 15:45:15 [INFO] Use the following config to build model
model:backbone:pretrained: https://bj.bcebos.com/paddleseg/dygraph/PP_STDCNet2.tar.gztype: STDC2num_classes: 2type: PPLiteSeg
W0417 15:45:15.177150 6210 gpu_resources.cc:61] Please NOTE: device: 0, GPU Compute Capability: 8.0, Driver API Version: 11.2, Runtime API Version: 11.2
W0417 15:45:15.177177 6210 gpu_resources.cc:91] device: 0, cuDNN Version: 8.2.
2023-04-17 15:45:16 [INFO] Loading pretrained model from https://bj.bcebos.com/paddleseg/dygraph/PP_STDCNet2.tar.gz
2023-04-17 15:45:16 [INFO] There are 265/265 variables loaded into STDCNet.
2023-04-17 15:45:16 [INFO] The number of images: 3
2023-04-17 15:45:16 [INFO] Loading pretrained model from output/best_model/model.pdparams
2023-04-17 15:45:16 [INFO] There are 370/370 variables loaded into PPLiteSeg.
2023-04-17 15:45:16 [INFO] Start to predict...
3/3 [==============================] - 2s 626ms/step
2023-04-17 15:45:18 [INFO] Predicted images are saved in output/result/added_prediction and output/result/pseudo_color_prediction .- 512- 512type: RandomPaddingCrop- type: RandomHorizontalFlip- brightness_range: 0.5contrast_range: 0.5saturation_range: 0.5type: RandomDistort- type: Normalizetype: Dataset
val_dataset:dataset_root: data/optic_disc_segmode: valnum_classes: 2transforms:- type: Normalizetype: Datasetval_path: data/optic_disc_seg/val_list.txt
optimizer:momentum: 0.9type: SGDweight_decay: 4.0e-05
lr_scheduler:end_lr: 0learning_rate: 0.01power: 0.9type: PolynomialDecay
loss:coef:- 1- 1- 1types:- type: CrossEntropyLoss- type: CrossEntropyLoss- type: CrossEntropyLoss
model:backbone:pretrained: https://bj.bcebos.com/paddleseg/dygraph/PP_STDCNet2.tar.gztype: STDC2num_classes: 2type: PPLiteSeg
------------------------------------------------2023-04-17 15:45:15 [INFO] Set device: gpu
2023-04-17 15:45:15 [INFO] Use the following config to build model
model:backbone:pretrained: https://bj.bcebos.com/paddleseg/dygraph/PP_STDCNet2.tar.gztype: STDC2num_classes: 2type: PPLiteSeg
W0417 15:45:15.177150 6210 gpu_resources.cc:61] Please NOTE: device: 0, GPU Compute Capability: 8.0, Driver API Version: 11.2, Runtime API Version: 11.2
W0417 15:45:15.177177 6210 gpu_resources.cc:91] device: 0, cuDNN Version: 8.2.
2023-04-17 15:45:16 [INFO] Loading pretrained model from https://bj.bcebos.com/paddleseg/dygraph/PP_STDCNet2.tar.gz
2023-04-17 15:45:16 [INFO] There are 265/265 variables loaded into STDCNet.
2023-04-17 15:45:16 [INFO] The number of images: 3
2023-04-17 15:45:16 [INFO] Loading pretrained model from output/best_model/model.pdparams
2023-04-17 15:45:16 [INFO] There are 370/370 variables loaded into PPLiteSeg.
2023-04-17 15:45:16 [INFO] Start to predict...
3/3 [==============================] - 2s 626ms/step
2023-04-17 15:45:18 [INFO] Predicted images are saved in output/result/added_prediction and output/result/pseudo_color_prediction .
使用原来的predict.py预测,只会产生两组结果added_prediction、pseudo_color_prediction:
修改后的predict.py,可以产生annotations.json(才能让PaddleSeg直接读取,并微调mask)
七、调整mask
使用PaddleSeg微调新数据的标签,存为json格式新标签;人工微调之后的结果,保存在data/optic_disc_seg_add中,以供查看。
把上述annotations.json放入label中,和原图放入一个目录中,
打开标注软件:
%cd /home/aistudio/PaddleSeg/EISeg
!python -m eiseg
模型参数加载:加载模型时选择output/infer_model/model.pdiparams即可。
图像加载:打开上述图像文件夹;
微调mask,可以调整眼底的轮廓points,形成新的mask并保存。
八、再次训练
把这批新数据集和对应标签,重新训练模型v2.0:已经放到data/optic_disc_seg_new中。
把新增图像和标注*_pseudo.png分别放入原数据集的JPEGImages和Annotations文件夹中,并修改train_list.txt。
九、小结
加入一批标注好的数据后,再次进行训练,循环往复;随着数据一批批的添加,训练出来的模型更加精准,所需微调的mask也会越少。
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此文章为搬运
原项目链接